plot_bg: Plot background

In Keniajin/protGear: Protein Micro Array Data Management and Interactive Visualization

Plot background

Description

A generic function for plotting of R objects.

Usage

plot_bg(df, x_axis = "antigen", bg_MFI = "BG_Median", log_mfi = TRUE)

Arguments

df	A default dataset to use for plot.
x_axis	The variable on the x axis
bg_MFI	A numeric variable describing which is the background MFI
log_mfi	a logical value indicating whether the MFI values should be log transformed or not.

Value

A ggplot of background values

Examples

## Not run:
#After extracting the background using \code{\link{extract_bg}} 
#we plot the data using
allData_bg <- readr::read_csv(system.file("extdata", "bg_example.csv",
 package="protGear"))
plot_bg(allData_bg,
x_axis = "antigen",
bg_MFI = "BG_Median",  log_mfi = TRUE
)
## End(Not run)

Keniajin/protGear documentation built on Feb. 6, 2023, 6:28 p.m.