plot_buffer: Plot the buffer values

In Keniajin/protGear: Protein Micro Array Data Management and Interactive Visualization

Plot the buffer values

Description

Plot the buffer values

Usage

plot_buffer(
  df = buffers,
  buffer_names = "antigen",
  buffer_mfi = "FMedianBG_correct",
  slide_id = ".id"
)

Arguments

df	A data frame to be used to plot
buffer_names	A character string containing the name of the variable with buffer spots. Default set to 'antigen'.
buffer_mfi	A character string containing the name of the variable with MFI value.Assuming background correction is done already. Default to 'FMedianBG_correct'
slide_id	A character string containing the name of the slide/array identifier variable.

Value

plot of buffer spots

Examples

buffers <- readr::read_csv(system.file("extdata", "buffers_sample2.csv",
package="protGear"))
plot_buffer(df=buffers,buffer_names = "sampleID")

Keniajin/protGear documentation built on Feb. 6, 2023, 6:28 p.m.