CollapseStrands: Collapse strands
In Krebslabrep/SingleMoleculeFootprinting: Analysis tools for Single Molecule Footprinting (SMF) data
View source: R/context_methylation_functions.r
CollapseStrands R Documentation
Collapse strands
Description
Collapse strands
Usage
CollapseStrands(MethGR, context)
Arguments
MethGR
Granges obj of average methylation
context
"GC" or "CG". Broad because indicates just the directionality of collapse.
Value
MethGR with collapsed strands (everything turned to - strand)
Krebslabrep/SingleMoleculeFootprinting documentation built on Nov. 19, 2022, 3:56 a.m.
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View source: R/context_methylation_functions.r
| CollapseStrands | R Documentation |
Collapse strands
Description
Collapse strands
Usage
CollapseStrands(MethGR, context)
Arguments
MethGR |
Granges obj of average methylation |
context |
"GC" or "CG". Broad because indicates just the directionality of collapse. |
Value
MethGR with collapsed strands (everything turned to - strand)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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