connect_to_snp_ensembl: Connect to snp Mart
In MCorentin/vargen: Fetching Variants Related to Phenotypes Using Public Databases
connect_to_snp_ensembl R Documentation
Connect to snp Mart
Description
Connect to the "hsapiens_snp" dataset in the "snp" BioMart
database, using useEnsembl
Usage
connect_to_snp_ensembl(mirror = "www")
Arguments
mirror
(optional) to use an alternative mirror. see
useEnsembl for the possible values (default:"www")
Value
a Mart object with a connection to the "hsapiens_snp" dataset
Examples
# Connect with the default mirror
ensembl <- connect_to_snp_ensembl()
# Connect with the "www" mirror
www_ensembl <- connect_to_snp_ensembl(mirror="www")
MCorentin/vargen documentation built on Feb. 6, 2024, 2:32 p.m.
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| connect_to_snp_ensembl | R Documentation |
Connect to snp Mart
Description
Connect to the "hsapiens_snp" dataset in the "snp" BioMart
database, using useEnsembl
Usage
connect_to_snp_ensembl(mirror = "www")
Arguments
mirror |
(optional) to use an alternative mirror. see
|
Value
a Mart object with a connection to the "hsapiens_snp" dataset
Examples
# Connect with the default mirror
ensembl <- connect_to_snp_ensembl()
# Connect with the "www" mirror
www_ensembl <- connect_to_snp_ensembl(mirror="www")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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