Files in MJomaba/flu-evidence-synthesis
Flu Evidence Synthesis: Analysing Effectiveness of Vaccine Strategies

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
NAMESPACE
R/RcppExports.R R/cost_effectiveness.R R/data.R R/demography.R R/deprecated.R R/epimodel.R R/ggplot2_ext.R R/mcmc.R R/vaccine.R README.md
autotest.sh
build.sh
data/age_sizes.rda
data/confirmed.samples.rda
data/coverage.rda
data/demography.rda
data/ili.rda
data/inference.results.rda
data/mcmcsample.rda
data/polymod_uk.rda
data/uptake.rda
data/vaccine_calendar.rda
epiEvidenceSynthesis.Rproj
inst/CITATION
install.sh
man/StatCI.Rd man/adaptive.mcmc.Rd man/adaptive.mcmc.cpp.Rd man/age_group_levels.Rd man/age_group_limits.Rd man/age_group_mapping.Rd man/age_sizes.Rd man/aggregateModel.Rd man/as.age.group.Rd man/as.vaccination.calendar.Rd man/as_R0.Rd man/as_age_group.Rd man/as_transmission_rate.Rd man/as_vaccination_calendar.Rd man/confirmed.samples.Rd man/contact.matrix.Rd man/contact_matrix.Rd man/coverage.Rd man/credible.interval.model.Rd man/demography.Rd man/dmultinom.cpp.Rd man/getTimeFromWeekYear.Rd man/ili.Rd man/infectionODEs.Rd man/infectionODEs.cpp.Rd man/inference.Rd man/inference.results.Rd man/inference_multistrains.Rd man/log_likelihood_cases.Rd man/mcmcsample.Rd man/parameter_mapping.Rd man/polymod_uk.Rd man/public_health_outcome.Rd man/read.legacy.vaccine.file.Rd man/risk_group_mapping.Rd man/separate.into.age.groups.Rd man/separate.into.risk.groups.Rd man/stat_ci.Rd man/stratify_by_age.Rd man/stratify_by_risk.Rd man/uptake.Rd man/vaccinationScenario.Rd man/vaccination_scenario.Rd man/vaccine.calendar.Rd man/vaccine_calendar.Rd man/vaccine_doses.Rd
src/RcppExports.cpp
src/contacts.cc
src/contacts.h
src/data.cc
src/data.h
src/fluEvidenceSynthesis_types.h
src/inference.cc
src/inference.h
src/mcmc.h
src/model.cc
src/model.h
src/ode.cc
src/ode.h
src/proposal.cc
src/proposal.h
src/rapi.cc
src/rcppwrap.cc
src/rcppwrap.h
src/state.cc
src/state.h
src/vaccine.cc
src/vaccine.h
tests/manual/README.md
tests/manual/runManualTests.sh
tests/manual/testInference.R tests/testthat.R tests/testthat/testContacts.R tests/testthat/testCostEffectiveness.R tests/testthat/testCovariance.R tests/testthat/testDemography.R tests/testthat/testInference.R tests/testthat/testMCMC.R tests/testthat/testODE.R tests/testthat/testVaccine.R
travis.sh
vignettes/adapting-the-transmission-model.Rmd vignettes/inference.Rmd vignettes/modelling.Rmd
vignettes/references.bib
vignettes/vaccination.Rmd
MJomaba/flu-evidence-synthesis documentation built on Sept. 20, 2018, 1:21 p.m.