deepblue_enrich_regions_fast: enrich_regions_fast

Description Usage Arguments Value See Also

Description

Enrich the regions based on regions bitmap signature comparison.

Usage

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deepblue_enrich_regions_fast(query_id = NULL, genome = NULL,
  epigenetic_mark = NULL, biosource = NULL, sample = NULL,
  technique = NULL, project = NULL,
  user_key = deepblue_options("user_key"))

Arguments

query_id

- A string (Query ID)

genome

- A string or a vector of string (the target genome)

epigenetic_mark

- A string or a vector of string (name(s) of selected epigenetic mark(s))

biosource

- A string or a vector of string (name(s) of selected biosource(s))

sample

- A string or a vector of string (id(s) of selected sample(s))

technique

- A string or a vector of string (name(s) of selected technique(s))

project

- A string or a vector of string (name(s) of selected projects)

user_key

- A string (users token key)

Value

request_id - A string (Request ID - Use it to retrieve the result with info() and get_request_data(). The result is a list containing the datasets that overlap with the query_id regions.)

See Also

Other Enrich the genome regions: deepblue_enrich_regions_go_terms, deepblue_enrich_regions_overlap


MPIIComputationalEpigenetics/DeepBlueR documentation built on May 8, 2019, 3:19 p.m.