deepblue_get_request_data: get_request_data
In MPIIComputationalEpigenetics/DeepBlueR: DeepBlueR
Description
Usage
Arguments
Value
See Also
Examples
Description
Download the requested data. The output can be (i) a string (get_regions, score_matrix, and count_regions), or (ii) a list of ID and names (get_experiments_by_query), or (iii) a struct (coverage).
Usage
1
2
deepblue_get_request_data(request_id = NULL,
user_key = deepblue_options("user_key"))
Arguments
request_id
- A string (ID of the request)
user_key
- A string (users token key)
Value
data - A string or a vector of string (the request data)
See Also
Other Requests status information and results: deepblue_list_requests
Examples
1
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3
4
5
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7
data_id = deepblue_select_experiments(
experiment_name="E002-H3K9ac.narrowPeak.bed",
chromosome="chr1")
request_id = deepblue_get_regions(
query_id =data_id,
output_format = "CHROMOSOME,START,END")
deepblue_get_request_data(request_id = request_id)
MPIIComputationalEpigenetics/DeepBlueR documentation built on Aug. 11, 2021, 4:12 p.m.
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Description Usage Arguments Value See Also Examples
Description
Download the requested data. The output can be (i) a string (get_regions, score_matrix, and count_regions), or (ii) a list of ID and names (get_experiments_by_query), or (iii) a struct (coverage).
Usage
1 2 | deepblue_get_request_data(request_id = NULL,
user_key = deepblue_options("user_key"))
|
Arguments
request_id |
- A string (ID of the request) |
user_key |
- A string (users token key) |
Value
data - A string or a vector of string (the request data)
See Also
Other Requests status information and results: deepblue_list_requests
Examples
1 2 3 4 5 6 7 | data_id = deepblue_select_experiments(
experiment_name="E002-H3K9ac.narrowPeak.bed",
chromosome="chr1")
request_id = deepblue_get_regions(
query_id =data_id,
output_format = "CHROMOSOME,START,END")
deepblue_get_request_data(request_id = request_id)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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