deepblue_get_biosource_parents: get_biosource_parents

In MPIIComputationalEpigenetics/DeepBlueR: DeepBlueR

Description

A BioSource refers to a term describing the origin of a given sample, such as a tissue or cell line. These form a hierarchy in which the parent of a BioSource term can be fetched with this command. Parent terms are more generic terms that are defined in the imported ontologies.

Usage

deepblue_get_biosource_parents(biosource = NULL,
  user_key = deepblue_options("user_key"))

Arguments

biosource	- A string (biosource name)
user_key	- A string (users token key)

Value

biosources - A array (parents biosources)

See Also

Other Set the relationship between different biosources: deepblue_get_biosource_children, deepblue_get_biosource_related, deepblue_get_biosource_synonyms

Examples

deepblue_get_biosource_parents(biosource = "Blood")

MPIIComputationalEpigenetics/DeepBlueR documentation built on Aug. 11, 2021, 4:12 p.m.