deepblue_filter_regions: filter_regions

Description Usage Arguments Value See Also Examples

Description

Filter the genomic regions by their content.

Usage

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deepblue_filter_regions(query_id = NULL, field = NULL, operation = NULL,
  value = NULL, type = NULL, user_key = deepblue_options("user_key"))

Arguments

query_id

- A string (Query ID)

field

- A string (field that is filtered by)

operation

- A string (operation used for filtering. For 'string' must be '==' or '!=' and for 'number' must be one of these: ==,!=,>,>=,<,<=)

value

- A string (value the operator is applied to)

type

- A string (type of the value: 'number' or 'string' )

user_key

- A string (users token key)

Value

id - A string (id of filtered query)

See Also

Other Operating on the data regions: deepblue_aggregate, deepblue_binning, deepblue_count_regions, deepblue_coverage, deepblue_distinct_column_values, deepblue_extend, deepblue_flank, deepblue_get_experiments_by_query, deepblue_get_regions, deepblue_input_regions, deepblue_intersection, deepblue_merge_queries, deepblue_overlap, deepblue_query_cache, deepblue_query_experiment_type, deepblue_score_matrix, deepblue_select_annotations, deepblue_select_experiments, deepblue_select_regions, deepblue_tiling_regions

Examples

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deepblue_filter_regions(query_id = "q12345",
    field = "VALUE",
    operation = ">",
    value = "100",
    type = "number",
    user_key = "anonymous_key")

MPIIComputationalEpigenetics/DeepBlueR documentation built on May 8, 2019, 3:19 p.m.