mr_forest_plot_grouped: Grouped forest plot
In MRCIEU/TwoSampleMR: Two Sample MR Functions and Interface to MR Base Database

mr_forest_plot_grouped

R Documentation

Grouped forest plot

Description

Grouped forest plot

Usage

mr_forest_plot_grouped(
  name,
  eff_Col = "b",
  exposure_Name = "exposure",
  outcome_Name = "outcome",
  forest_Title = "",
  outfile_Name = "annot_FP.pdf",
  left_Col_Names = c("Exposure", "Outcome"),
  left_Col_Titles = NULL,
  right_Col_Names = c("p", "Outcome.n.case", "Outcome.n.control", "Outcome.sample.size"),
  right_Col_Titles = NULL,
  debug = FALSE,
  log_ES = FALSE,
  decrease = TRUE,
  returnRobj = TRUE,
  se_Col = "se"
)

Arguments

`name`	(character) name of the delimited file containing all of the results on the first sheet (needs to have headers), or of the r object.
`eff_Col`	(character) name of the column in the delimited file that contains the effect sizes.
`exposure_Name`	(character) name of the column in the delimited file containing the types of studies.
`outcome_Name`	(character) name of the column in the delimited file containing the names of each study.
`forest_Title`	(character) the title to be used for a forest plot.
`outfile_Name`	(character) name to be used for output file (.pdf) or (.wmf).
`left_Col_Names`	(character vector) vector containing the names of the left-hand-side annotation columns in the delimited file.
`left_Col_Titles`	(character vector) vector containing the titles for each left-hand-side annotation column.
`right_Col_Names`	(character vector) vector containing the names of the right-hand-side annotation columns in the delimited file.
`right_Col_Titles`	(character vector) vector containing the titles for each right-hand-side annotation column.
`debug`	(logical) show warnings `TRUE`/`FALSE`?
`log_ES`	(logical) perform natural log transform of effect sizes and confidence bounds `TRUE`/`FALSE`?
`decrease`	(logical) sort the studies by decreasing effect sizes `TRUE`/`FALSE`?
`returnRobj`	(logical) return the graph as an internal R object `TRUE`/`FALSE`?
`se_Col`	(character) name of the column giving the standard error of the effect sizes.