check_any_net_input: check_any_net_input
In MTZimmer/RITAN: Rapid Integration of Term Annotation and Network resources
Description
Usage
Arguments
Value
Examples
Description
A Quality Control function. This function applies check_net_input() to all available resources (default).
Usage
1
check_any_net_input(set, resources = names(network_list))
Arguments
set
An input list of genes to check against references.
resources
The collection of network resources to check within.
Value
Logical vector indicating if the genes in "set" are within ANY of the resources.
Examples
1
2
3
4
5
#' ## Check if genes in myGeneSet are annotated by any resource in "network_list" (default).
library(RITANdata)
myGeneSet <- c('BRCA1','RAD51C','VAV1','HRAS','ABCC1','CYP1B1','CYP3A5')
yorn <- check_any_net_input( myGeneSet )
print(yorn)
MTZimmer/RITAN documentation built on Feb. 21, 2020, 7:09 a.m.
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Description Usage Arguments Value Examples
Description
A Quality Control function. This function applies check_net_input() to all available resources (default).
Usage
1 | check_any_net_input(set, resources = names(network_list))
|
Arguments
set |
An input list of genes to check against references. |
resources |
The collection of network resources to check within. |
Value
Logical vector indicating if the genes in "set" are within ANY of the resources.
Examples
1 2 3 4 5 | #' ## Check if genes in myGeneSet are annotated by any resource in "network_list" (default).
library(RITANdata)
myGeneSet <- c('BRCA1','RAD51C','VAV1','HRAS','ABCC1','CYP1B1','CYP3A5')
yorn <- check_any_net_input( myGeneSet )
print(yorn)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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