amp_rarefy: Rarefy ampvis2 object
In MadsAlbertsen/ampvis2: Tools for visualising amplicon data
amp_rarefy R Documentation
Rarefy ampvis2 object
Description
This is just a wrapper of rrarefy with convenient error messages and adjusted to work with ampvis2 objects.
Usage
amp_rarefy(data, rarefy)
Arguments
data
(required) Data list as loaded with amp_load.
rarefy
(required) Passed directly to rrarefy.
Value
An ampvis2 object with rarefied OTU abundances.
Author(s)
Kasper Skytte Andersen ksa@bio.aau.dk
Examples
data("AalborgWWTPs")
AalborgWWTPs
rarefied <- amp_rarefy(AalborgWWTPs, 20000)
rarefied
MadsAlbertsen/ampvis2 documentation built on Jan. 28, 2024, 7:12 a.m.
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| amp_rarefy | R Documentation |
Rarefy ampvis2 object
Description
This is just a wrapper of rrarefy with convenient error messages and adjusted to work with ampvis2 objects.
Usage
amp_rarefy(data, rarefy)
Arguments
data |
(required) Data list as loaded with |
rarefy |
(required) Passed directly to |
Value
An ampvis2 object with rarefied OTU abundances.
Author(s)
Kasper Skytte Andersen ksa@bio.aau.dk
Examples
data("AalborgWWTPs")
AalborgWWTPs
rarefied <- amp_rarefy(AalborgWWTPs, 20000)
rarefied
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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