msms.batch: Produce a decoy database

In ManuelPerisDiaz/CysMpro: Mass Spectrometry-Based Structural Analysis of Metalloproteins

Description

Produce a decoy database

Usage

msms.batch(
  sequence,
  missed,
  tol,
  mzML = TRUE,
  label = "Decoy",
  Score,
  plot = FALSE,
  write.csv = FALSE,
  write.csvb = TRUE
)

Arguments

sequence	protein sequence
missed	Control enzymatic digestion
tol	mass error tolerance
mzML	If TRUE, the file input is in mzML file format
label	Name to save
Score	Score
plot	If TRUE, plot results
write.csv	IF TRUE, expor results in csv
write.csvb	IF TRUE, expor results in csv

Value

Decoy database

ManuelPerisDiaz/CysMpro documentation built on Oct. 18, 2020, 6:44 a.m.