ScoresPMF: Scoring function for peptide mass fingerprint MALDI-MS...

In ManuelPerisDiaz/CysMpro: Mass Spectrometry-Based Structural Analysis of Metalloproteins

Description

Scoring function for peptide mass fingerprint MALDI-MS experiment.

Usage

ScoresPMF(
  sequence,
  maldiTOF,
  TheoreticalMass,
  Total,
  Mw,
  write = TRUE,
  save.name,
  missed,
  enzym = "trypsin"
)

Arguments

sequence	Protein sequence.
maldiTOF	Output obtained from annotationMALDI_Bot.
TheoreticalMass	Output obtained from Protein.to.Peptide.
Total	Number of amino acids in the protein sequence.
Mw	Molecular weight of the protein assayed.
write	Write output with PMF score.
save.name	Name to save the output results.
missed	Number of missed proteolytic cleavages
enzym	Enzyme used for proteolysis.

Value

Annotation score for PMF MALDI-MS.

ManuelPerisDiaz/CysMpro documentation built on Oct. 18, 2020, 6:44 a.m.