generateToyDesign: Generate an experimental design for a toy network

In MathurinD/STASNet: Fit and Simulate Model from Perturbation Data

Description

Generate an experimental design for a toy network, with all stimulus applied, some nodes inhibited and some nodes measured

Usage

generateToyDesign(network, nmes = 4, ninh = 2, stim_combo = 1,
  inhib_combo = 1)

Arguments

network	A 2-columns matrix. The toy network as an adjacency list
nmes	Number of measured nodes
ninh	Number of inhibited nodes
stim_combo	Number of simultaneous stimulations
inhib_combo	Number of simultaneous inhibitions

Value

An experimental design object

See Also

getCombinationMatrix, generateToyNetwork

Other toy data generation: addLayerLinks, createSimulation, generateToyNetwork

MathurinD/STASNet documentation built on May 28, 2019, 1:50 p.m.