getDirectPaths: Compute direct paths for a model
In MathurinD/STASNet: Fit and Simulate Model from Perturbation Data
Description
Usage
Arguments
Value
Description
Compute the direct paths for a model and their confidence intervals by combining the paths containing links with negative exponents with paths containing the same link with a positive exponent.
Print the direct paths with confidence interval
Usage
1
2
3
getDirectPaths(mra_model, non_stop_nodes = c())
printDirectPaths(mra_model, digits = 2)
Arguments
mra_model
An MRAmodel object
non_stop_nodes
A list of nodes that should not begin or end a path, usefull to compare models with different basal activities. If the node is only present as a first or last node of a path, the corresponding paths will be deleted.
digits
Number of digits to display for the confidence interval values
Value
A list of lists indexed by the path name. Each sublist has fields path, value, hv and lv which represent respectively the path equation, the value of the path, the upper bound of the path and the lower bound of the path.
Hidden. The direct paths
MathurinD/STASNet documentation built on May 28, 2019, 1:50 p.m.
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Description Usage Arguments Value
Description
Compute the direct paths for a model and their confidence intervals by combining the paths containing links with negative exponents with paths containing the same link with a positive exponent.
Print the direct paths with confidence interval
Usage
1 2 3 | getDirectPaths(mra_model, non_stop_nodes = c())
printDirectPaths(mra_model, digits = 2)
|
Arguments
mra_model |
An MRAmodel object |
non_stop_nodes |
A list of nodes that should not begin or end a path, usefull to compare models with different basal activities. If the node is only present as a first or last node of a path, the corresponding paths will be deleted. |
digits |
Number of digits to display for the confidence interval values |
Value
A list of lists indexed by the path name. Each sublist has fields path, value, hv and lv which represent respectively the path equation, the value of the path, the upper bound of the path and the lower bound of the path.
Hidden. The direct paths
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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