combiner: combiner combines the miRNA and mRNA files

In Mercedeh66/mirTarRnaSeq: mirTarRnaSeq

combiner combines the miRNA and mRNA files

Description

This function makes and intersection dataframe for mRNA and miRNA/s of interest to be tested.

Usage

combiner(mRNA, miRNA, miRNA_select)

Arguments

mRNA	Matrix or data.frame mRNA/RNA from transforemed diff expression file (genrated using TZtranz)
miRNA	Matrix or data frame miRNA from transforemed diff file (genrated using TZtranz)
miRNA_select	A vector of character's for miRNAs which the user is interested in investigating if glm is use 1 miRNA should be input. If multivariate several miRNAs should be imported, same goes for interaction determination for miRNAs. Note we do not recommend more than 3-4 miRNAs at a time for the latter cases.

Value

A dataframe which includes only mRNAs and miRNA intersection for the next estimation geneVari output.

Examples

miRNA_select <- c("ebv-mir-bart9-5p")
x <- combiner(mRNA, miRNA, miRNA_select)

Mercedeh66/mirTarRnaSeq documentation built on April 14, 2023, 6:49 a.m.