fdrSig: fdrSig Ruturns FDR significant miRNA/mRNA predictions

In Mercedeh66/mirTarRnaSeq: mirTarRnaSeq

fdrSig Ruturns FDR significant miRNA/mRNA predictions

Description

This function performs FDR correction on the p_values generated by the runModels function list.

Usage

fdrSig(RMObj, value = 0.05, method = "fdr")

Arguments

RMObj	The output of runModels
value	The FDR value default is 0.1
method	The p-value adjustment method default is fdr. It could be either of the following "holm", "hochberg", "hommel","bonferroni", "BH", "BY", or "fdr".

Value

A list of FDR corrected p vlaues, annova, and significance for each gene and the miRNA/s of interest

Examples

models <- runModels(Combine, geneVariant, "ebv-mir-bart9-5p")
x <- fdrSig(models, value = 0.1, method = "fdr")

Mercedeh66/mirTarRnaSeq documentation built on April 14, 2023, 6:49 a.m.