Man pages for Michael-Stevens-27/silverblaze
Geographic Profiling in R

bearing_to_lonlatGet spatial coordinate given an origin, a great circle...
bind_dataBind data to project
check_silverblaze_loadedCheck that silverblaze package has loaded successfully
delete_setDelete parameter set
dispersal_sphereDraw from spherical distribution
dist_gcCalculate pairwise great circle distance between points
get_hitscoresGet hitscores
get_outputGet specified output from project
giniCalculate Gini coefficient
is.rgeoprofile_projectDetermine if object is of class rgeoprofile_project
kernel_smoothProduce a smooth surface using 2D kernel density smoothing
lonlat_to_bearingCalculate great circle distance and bearing between...
lonlat_to_cartesianConvert lon/lat to cartesian coordinates
more_coloursExpand series of colours by interpolation
new_setCreate new parameter set
optimise_betaOptimise beta values for MCMC rungs
overlay_geoprofileAdd geoprofile to dynamic map
overlay_piechartsAdd pie charts to dynamic map
overlay_pointsAdd points to dynamic map
overlay_ringsearchAdd ring-search geoprofile to dynamic map
overlay_risk_mapAdd risk surface to dynamic map
overlay_sentinelsAdd sentinel sites to dynamic map
overlay_sourcesAdd sources to dynamic map
overlay_spatial_priorAdd spatial prior to dynamic map
overlay_surfaceAdd posterior probability surface to dynamic map
overlay_trial_sitesAdd trial sites to dynamic map
plot_acfProduce MCMC autocorrelation plot
plot_alphaPlot alpha 95% credible intervals
plot_couplingPlot acceptance rate between rungs
plot_densityProduce MCMC density plot
plot_DIC_gelmanPlot DIC over all K
plot_expected_popsizePlot expected population size 95% credible intervals
plot_loglikePlot loglikelihood 95% credible intervals
plot_loglike_diagnosticProduce diagnostic plots of log-likelihood
plot_lorenzProduce Lorenz plot of hitscores
plot_mapCreate dynamic map
plot_sigmaPlot sigma 95% credible intervals
plot_structurePosterior allocation plot
plot_traceProduce MCMC trace plot
print_fullOrdinary print function for class rgeoprofile_project
raster_from_shapefileMake raster from shapefile
raster_gridMake raster grid
realised_sourcesCalculate realised sources
rgeoprofile_fileImport file
rgeoprofile_projectCreate a new RgeoProfile project
rgeoprofile_shapefileImport shapefile
run_mcmcRun main MCMC
silverblazeBayesian Geographic Profiling from Presence-Absence Data
sim_dataSimulate data
Michael-Stevens-27/silverblaze documentation built on May 28, 2021, 5:47 p.m.