plot_loglike_diagnostic: Produce diagnostic plots of log-likelihood

In Michael-Stevens-27/silverblaze: Geographic Profiling in R

Description

Produce diagnostic plots of the log-likelihood.

Usage

plot_loglike_diagnostic(
  project,
  K = NULL,
  rung = NULL,
  phase = "sampling",
  col = "black"
)

Arguments

project	an RgeoProfile project, as produced by the function rgeoprofile_project().
K	which value of K to plot.
rung	which rung to plot. Defaults to the cold chain.
phase	check the burnin or sampling phase of the MCMC chain
col	colour of the trace.

Details

For a value of K produce the auto-correlation, trace and density plots of the MCMC.

Examples

plot_loglike_diagnostic(project = p, K = 2)

Michael-Stevens-27/silverblaze documentation built on May 28, 2021, 5:47 p.m.