Man pages for Michorlab/ACESO
A Cancer Evolution Simulation Optimizer
| ACESO | ACESO |
| Alpelisib_sensitive | Alpelisib_sensitive dataset |
| Alpelisib_Trametinib_combination | Alpelisib_Trametinib_combination dataset |
| AU565_dataset | AU565 dataset |
| best.singlefit | best.singlefit |
| calculate_death_rate | calculate_death_rate |
| curve.fit | curve.fit |
| Dactolisib_Trametinib_combination | Dactolisib_Trametinib_combination dataset |
| define.Type0.cells | define.Type0.cells |
| define.Typei.cells | define.Typei.cells |
| define.Typeicr.cells | define.Typeicr.cells |
| DifferenceSurface.plot | DifferenceSurface.plot |
| easy.mrgsim | Simulate from a model object |
| En_crossresistant_cells_i | En_crossresistant_cells_i |
| En_resistant_cells | En_resistant_cells |
| En_resistant_cells_i | En_resistant_cells_i |
| EN_type0_cells | EN_type0_cells |
| Estimate.PK | Estimate.PK |
| GD | Dactolisib_Trametinib_rates dataset |
| HSA | Fill the dataset with the predicted effect under Highest... |
| linear.fit | linear.fit |
| Loewe | Fill the dataset with the predicted effect under Loewe model |
| modelfit.plot | modelfit.plot |
| model_library | Internal model library from ACESO |
| model.select | model.select |
| Multiple.best.singlefit | Multiple.best.singlefit |
| Multiple.resp.surface.fit | Multiple.resp.surface.fit |
| Multiple.singlefit | Multiple.singlefit |
| net_growth_rate | net_growth_rate |
| Pext | Pext |
| Pext_preexisting_resist | Pext_preexisting_resist |
| PK.example | PK_example dataset |
| pk.function | pk.function |
| Prob_resistance | Prob_resistance |
| read.cellcount.data | read.cellcount.data |
| read.celldeath.file | read.celldeath.file |
| read.PKdata | read.PKdata |
| responseMap | responseMap |
| ResponseSurface.plot | ResponseSurface.plot |
| resp.surface.fit | resp.surface.fit |
| SynergyMatrix.plot | Colored concentration pairwise synergy matrix |
| Trametinib_sensitive | Trametinib_sensitive dataset |
| try.loewe | Compute the predicted effect under Loewe model |
