Pext: Pext

In Michorlab/ACESO: A Cancer Evolution Simulation Optimizer

Description

Probability of extinction at time Text of a single resistant cell produced at time t

Usage

Pext(t, Text, type_i, i, approximation = T,
  int.function = c("integrate", "pracma"))

Arguments

t	time of production of a resistant cell clone
Text	time of extinction
type_i	Type-i S4 object
i	resistant clone identifier
approximation	logical argument indicating if an approximation of the numerical integration method must be used or not. Default to TRUE for faster computation.
int.function	integration function. Possible options are "integrate" or "pracma". The default option is integrate function in R. If "pracma" is selected, the numerical integration methods from pracma package are used (more robust but slower option).

Value

Pext function returns the probability of extinction (between 0 and 1) at time T of a single resistant cell produced at time t

Michorlab/ACESO documentation built on June 4, 2021, 4:57 p.m.