View source: R/buildNhoodGraph.R

buildNhoodGraph | R Documentation |

Build an abstracted graph of neighbourhoods for visualization

buildNhoodGraph(x, overlap = 1)

`x` |
A |

`overlap` |
A numeric scalar that thresholds graph edges based on the number of overlapping cells between neighbourhoods. |

This constructs a weighted graph where nodes represent neighbourhoods and edges represent the number of overlapping cells between two neighbourhoods.

A `Milo`

object containg an `igraph`

graph in the `nhoodGraph`

slot.

Emma Dann

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