merge_all_metabolomics: Merge all metabolomics files

In MoTrPAC/MotrpacBicQC: QC/QA functions for the MoTrPAC community

Merge all metabolomics files

Description

Merge all metabolomics datasets, including "results" and "metadata" files, for both targeted and untargeted datasets

Usage

merge_all_metabolomics(m_m_n, m_m_u = NULL, m_s_n, r_m_n, r_m_u = NULL, phase)

Arguments

m_m_n	(metabolomics metadata named)
m_m_u	(metabolomics metadata unnamed)
m_s_n	(metabolomics sample named)
r_m_n	(results named)
r_m_u	(results unnamed)
phase	(MoTrPAC Animal phase. Eg. PASS1A-06)

Value

(data.frame) Merged data frame long format

Examples

plasma.untargeted.merged <- merge_all_metabolomics(
       m_m_n = metadata_metabolites_named,
       m_m_u = metadata_metabolites_unnamed,
       m_s_n = metadata_sample_named,
       r_m_n = results_named,
       r_m_u = results_unnamed,
       phase = "PASS1A-06")

MoTrPAC/MotrpacBicQC documentation built on Sept. 26, 2024, 11:10 a.m.