readLabWorksheet: Read lab worksheet into dataframe of annotations
In Nanostring-Biostats/SpatialOmicsOverlay: Spatial Overlay for Omic Data from Nanostring GeoMx Data
readLabWorksheet R Documentation
Read lab worksheet into dataframe of annotations
Description
Read lab worksheet into dataframe of annotations
Usage
readLabWorksheet(lw, slideName, roiCol = NULL, slideCol = NULL)
Arguments
lw
lab worksheet file path
slideName
name of slide
roiCol
column containing ROI information, if NULL function will determine automatically
slideCol
column containing slide name, if NULL function will determine automatically
Value
df of ROI annotations
Examples
muBrainLW <- system.file("extdata", "muBrain_LabWorksheet.txt",
package = "SpatialOmicsOverlay")
muBrainLW <- readLabWorksheet(muBrainLW, slideName = "D5761 (3)")
Nanostring-Biostats/SpatialOmicsOverlay documentation built on April 20, 2024, 5:36 a.m.
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| readLabWorksheet | R Documentation |
Read lab worksheet into dataframe of annotations
Description
Read lab worksheet into dataframe of annotations
Usage
readLabWorksheet(lw, slideName, roiCol = NULL, slideCol = NULL)
Arguments
lw |
lab worksheet file path |
slideName |
name of slide |
roiCol |
column containing ROI information, if NULL function will determine automatically |
slideCol |
column containing slide name, if NULL function will determine automatically |
Value
df of ROI annotations
Examples
muBrainLW <- system.file("extdata", "muBrain_LabWorksheet.txt",
package = "SpatialOmicsOverlay")
muBrainLW <- readLabWorksheet(muBrainLW, slideName = "D5761 (3)")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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