xmlExtraction: Extract xml from OME-TIFF
In Nanostring-Biostats/SpatialOmicsOverlay: Spatial Overlay for Omic Data from Nanostring GeoMx Data
View source: R/omeExtraction.R
xmlExtraction R Documentation
Extract xml from OME-TIFF
Description
Extract xml from OME-TIFF
Usage
xmlExtraction(ometiff, saveFile = FALSE, outdir = NULL)
Arguments
ometiff
path to OME-TIFF
saveFile
should xml be saved, file is saved in working directory with
same name as OME-TIFF
outdir
output directory for saved xml. If NULL, saved in same directory as OME-TIFF
Value
list of xml data
Examples
image <- downloadMouseBrainImage()
xml <- xmlExtraction(ometiff = image)
Nanostring-Biostats/SpatialOmicsOverlay documentation built on April 20, 2024, 5:36 a.m.
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View source: R/omeExtraction.R
| xmlExtraction | R Documentation |
Extract xml from OME-TIFF
Description
Extract xml from OME-TIFF
Usage
xmlExtraction(ometiff, saveFile = FALSE, outdir = NULL)
Arguments
ometiff |
path to OME-TIFF |
saveFile |
should xml be saved, file is saved in working directory with same name as OME-TIFF |
outdir |
output directory for saved xml. If NULL, saved in same directory as OME-TIFF |
Value
list of xml data
Examples
image <- downloadMouseBrainImage()
xml <- xmlExtraction(ometiff = image)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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