met.UpdateData: Remove defined samples and features from the metabolomics...
In NicWir/VisomX: User-Friendly and Comprehensive Analysis and Visualization of Omics Data
met.UpdateData R Documentation
Remove defined samples and features from the metabolomics dataset.
Description
met.UpdateData updates the mSet object after removing features or samples. This step is included in the data preparation workflow met.read_data.
Usage
met.UpdateData(
mSetObj = NA,
filt.feat = c(""),
filt.smpl = c(""),
filt.grp = c("")
)
Arguments
mSetObj
Enter the name of the created mSet object (see met.read_data).
filt.feat
(Character vector) Enter the names of features (compounds) to remove from the dataset.
filt.smpl
(Character vector) Enter the names of samples to remove from the dataset.
filt.grp
(Character vector) Enter the names of groups (conditions) to remove from the dataset.
Author(s)
Nicolas T. Wirth mail.nicowirth@gmail.com
Technical University of Denmark
License: GNU GPL (>= 2)
References
adapted from UpdateData (https://github.com/xia-lab/MetaboAnalystR).
NicWir/VisomX documentation built on Dec. 8, 2024, 1:27 a.m.
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| met.UpdateData | R Documentation |
Remove defined samples and features from the metabolomics dataset.
Description
met.UpdateData updates the mSet object after removing features or samples. This step is included in the data preparation workflow met.read_data.
Usage
met.UpdateData(
mSetObj = NA,
filt.feat = c(""),
filt.smpl = c(""),
filt.grp = c("")
)
Arguments
mSetObj |
Enter the name of the created mSet object (see |
filt.feat |
(Character vector) Enter the names of features (compounds) to remove from the dataset. |
filt.smpl |
(Character vector) Enter the names of samples to remove from the dataset. |
filt.grp |
(Character vector) Enter the names of groups (conditions) to remove from the dataset. |
Author(s)
Nicolas T. Wirth mail.nicowirth@gmail.com Technical University of Denmark License: GNU GPL (>= 2)
References
adapted from UpdateData (https://github.com/xia-lab/MetaboAnalystR).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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