rna.make_se: Create a SummarizedExperiment object

In NicWir/VisomX: User-Friendly and Comprehensive Analysis and Visualization of Omics Data

Create a SummarizedExperiment object

Description

This function takes gene expression data stored in a data frame with unique gene names and columns of expression data, as well as an experimental design data frame, and creates a SummarizedExperiment object.

Usage

rna.make_se(genes_unique, columns, expdesign)

Arguments

genes_unique	A data frame with unique gene names and columns of expression data.
columns	A vector of the column positions or names with expression data in genes_unique.
expdesign	A data frame of experimental design.

Details

used internally by rna.read_data().

Value

A SummarizedExperiment object.

NicWir/VisomX documentation built on Dec. 8, 2024, 1:27 a.m.