JC69: JC69 Substiution Model
In OJWatson/sims4: Epidemic generational simualator
Description
This function creates the rate matrix of the JC69 model before calculating the
related transition matrix, P, using the mutation and branch length/time from parent
variables.
Usage
1
Arguments
mu
- mutation rate
t
- branch length, i.e. specific generation time
OJWatson/sims4 documentation built on May 7, 2019, 8:33 p.m.
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Description
This function creates the rate matrix of the JC69 model before calculating the related transition matrix, P, using the mutation and branch length/time from parent variables.
Usage
1 |
Arguments
mu |
- mutation rate |
t |
- branch length, i.e. specific generation time |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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