register_genelist_gene: Register gene symbols in a gene-list

Description Usage Arguments Details Examples

View source: R/functions-register-general.R

Description

Preferred method of registering gene symbols in a genelist is to provide the target genelist_id and the symbols to be registered (one genelist at a time)

Usage

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register_genelist_gene(
  genelist_id = NULL,
  gene_symbols = NULL,
  df = NULL,
  only_test = FALSE,
  con = NULL
)

Arguments

genelist_id

the id of the genelist (returned by register_genelist())

gene_symbols

the gene-symbols to be stored in a gene-list (e.g. c('TSPAN6', 'KCNIP2', 'CFAP58', 'GOT1', 'CPN1', 'PSIP1P1'))

df

(optional) a data-frame containing genelist_id, gene_symbol

Details

Alternatively, one can supply a data.frame with genelist_id, gene_symbol

Examples

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register_genelist_gene(genelist_id = 11, # must already exist in `genelist` table
                       gene_symbols = c('TSPAN6', 'KCNIP2'))
                       

Paradigm4/insight documentation built on April 5, 2020, 1:12 p.m.