bw_go | Perform Gene ontology |
bw_pca | Groups samples based on signal. Useful for QC analysis |
check_bwtools | Checks for bwtool installation binary under system path or... |
clustered_profile_plot | Draw a profile plot |
diffpeak | Differentail Peak Analysis |
estimate_Pol2PI | Estimates polymerase index from Pol2 ChIP seq data. |
extract_matrix | Extract matrix of signal values from given bigWig files... |
extract_summary | Extract area under the curve for every peak from from given... |
peak_size | Plots peak size distribution |
plotgo | This function plots top ten GO process from GOSEq results |
plot_heatmap | Draw heatmap |
plot_profile | Draw a profile plot |
plotSE | Draw hocky-stick plot from super enhancer results. |
plot_summary | Groups samples based on signal. Useful for QC analysis |
plot_tracks | Draw a track view of geiven genomic loci |
read_coldata | Prepares meta data table from bigWig files. Output from this... |
summarize_homer_annots | Parse peak annotations generated by homer annotatePeaks.pl |
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