read_coldata: Prepares meta data table from bigWig files. Output from this...
In PoisonAlien/peakseason: Functions for faster ChIP/ATAC-seq analysis and visualization.
Description
Prepares meta data table from bigWig files.
Output from this fucntion is passed to all downstream functions.
Usage
1
read_coldata(coldata = NULL, files_idx = NULL, sample_idx = NULL)
Arguments
coldata
a data.frame or a tsv file contaning absolute path to bigWig files and other optional associated sample annotations
files_idx
column index containing path to bigWig files. Required.
sample_idx
column index containing sample names for corresponding bigWig files. Optional. Default NULL - creates one from bigWig files.
PoisonAlien/peakseason documentation built on May 14, 2019, 4:01 a.m.
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Description
Prepares meta data table from bigWig files. Output from this fucntion is passed to all downstream functions.
Usage
1 | read_coldata(coldata = NULL, files_idx = NULL, sample_idx = NULL)
|
Arguments
coldata |
a data.frame or a tsv file contaning absolute path to bigWig files and other optional associated sample annotations |
files_idx |
column index containing path to bigWig files. Required. |
sample_idx |
column index containing sample names for corresponding bigWig files. Optional. Default NULL - creates one from bigWig files. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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