buildGRangesObj: Build Genomic Ranges from data.frame

In ProfessionalFarmer/loonR: Common function in bioinformatics analysis

Build Genomic Ranges from data.frame

Description

Build Genomic Ranges from data.frame

Usage

buildGRangesObj(
  df,
  keep.extra.columns = T,
  seqnames.field = "chr",
  start.field = "start",
  end.field = "end",
  starts.in.df.are.0based = FALSE,
  strand.field = "strand"
)

Arguments

keep.extra.columns	Default TRUE
seqnames.field	Default "chr"
start.field	Default "start"
end.field	Default "end"
starts.in.df.are.0based	Default FALSE
strand.field	Default "strand"

ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.