cellline_drug_gene_correlation: Drug and gene correlation analysis

In ProfessionalFarmer/loonR: Common function in bioinformatics analysis

Drug and gene correlation analysis

Description

Drug and gene correlation analysis

Usage

cellline_drug_gene_correlation(
  drug.sen.df = NULL,
  gene.expr = NULL,
  p.cutoff = 0.01,
  cor.cutoff = 0.3,
  p.variable = "P",
  auc.cutoff = 0.8
)

Arguments

drug.sen.df	A data.frame. Row is drug, col is cell line
gene.expr	A vector with name. Name is cell line
p.cutoff	Default 0.01
cor.cutoff	rho 0.3
p.variable	column name of P value. Default P
auc.cutoff	Default 0.8

ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.