calculateNMI: Ranks each features by NMI (normalized mutual information)...
In ProfessionalFarmer/loonR: Common function in bioinformatics analysis
calculateNMI R Documentation
Ranks each features by NMI (normalized mutual information) based on their clustering assingments
Description
Ranks each features by NMI (normalized mutual information) based on their clustering assingments
Usage
calculateNMI(data.list, wall)
Arguments
data.list
A list, pls specify the name. Element is data.frame (Row is sample, column is feature.). dataL <- list( mRNA=t(mRNA.snf.df), miRNA=t(miRNA.snf.df), Met=t(methylation.snf.df), CNV=t(cnv.snf.df) ).
wall
ProfessionalFarmer/loonR documentation built on Oct. 9, 2024, 9:56 p.m.
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| calculateNMI | R Documentation |
Ranks each features by NMI (normalized mutual information) based on their clustering assingments
Description
Ranks each features by NMI (normalized mutual information) based on their clustering assingments
Usage
calculateNMI(data.list, wall)
Arguments
data.list |
A list, pls specify the name. Element is data.frame (Row is sample, column is feature.). dataL <- list( mRNA=t(mRNA.snf.df), miRNA=t(miRNA.snf.df), Met=t(methylation.snf.df), CNV=t(cnv.snf.df) ). |
wall |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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