df2GRanges: Convert from dataframe to GRanges
In RHReynolds/LDSCforRyten: Run LDSC on Ryten Lab Server
Description
Usage
Arguments
Value
View source: R/LDSC_Creatingannot_Functions.R
Description
Convert from dataframe to GRanges
Usage
1
df2GRanges(df, seqname_col, start_col, end_col)
Arguments
df
Dataframe with columns as sequence name, start, and end. Extra
columns kept as metadata.
seqname_col
Name of column containing chromsome name. Must be in
quotation marks.
start_col
Name of column containing start position. Must be in
quotation marks.
end_col
Name of column containing end position. Must be in quotation
marks.
Value
GRanges object with original data from dataframe.
RHReynolds/LDSCforRyten documentation built on Sept. 27, 2021, 5:20 p.m.
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Description Usage Arguments Value
View source: R/LDSC_Creatingannot_Functions.R
Description
Convert from dataframe to GRanges
Usage
1 | df2GRanges(df, seqname_col, start_col, end_col)
|
Arguments
df |
Dataframe with columns as sequence name, start, and end. Extra columns kept as metadata. |
seqname_col |
Name of column containing chromsome name. Must be in quotation marks. |
start_col |
Name of column containing start position. Must be in quotation marks. |
end_col |
Name of column containing end position. Must be in quotation marks. |
Value
GRanges object with original data from dataframe.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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