theme_RTCGA: RTCGA Theme for ggplot2

In RTCGA/RTCGA: The Cancer Genome Atlas Data Integration

RTCGA Theme for ggplot2

Description

Additional RTCGA theme for ggtheme, based on theme_pander.

Usage

theme_RTCGA(base_size = 11, base_family = "", ...)

Arguments

base_size	base font size
base_family	base font family
...	Further arguments passed to theme_pander.

Issues

If you have any problems, issues or think that something is missing or is not clear please post an issue on https://github.com/RTCGA/RTCGA/issues.

Author(s)

Marcin Kosinski, [e-mail]

See Also

RTCGA website http://rtcga.github.io/RTCGA/articles/Visualizations.html.

Other RTCGA: RTCGA-package, boxplotTCGA(), checkTCGA(), convertTCGA(), datasetsTCGA, downloadTCGA(), expressionsTCGA(), heatmapTCGA(), infoTCGA(), installTCGA(), kmTCGA(), mutationsTCGA(), pcaTCGA(), readTCGA(), survivalTCGA()

Examples

library(RTCGA.clinical)
survivalTCGA(BRCA.clinical, OV.clinical, extract.cols = "admin.disease_code") -> BRCAOV.survInfo
kmTCGA(BRCAOV.survInfo, explanatory.names = "admin.disease_code",
			 xlim = c(0,4000))
					 

RTCGA/RTCGA documentation built on Nov. 1, 2022, 8:15 p.m.