add_custom_vcf_to_database | add_custom_vcf_to_database This function adds the variants of... |
add_missing_cls | add_missing_cls |
add_penalty_statistics | add_penalty_statistics |
add_p_q_values_statistics | add_p_q_values_statistics |
create_bed_file | create_bed_file |
identify_vcf_file | identify_VCF_file |
init_and_load_identification | init_and_load_identification |
initiate_canonical_databases | initiate_canonical_databases |
match_query_ccl_to_database | match_query_ccl_to_database |
parse_ccle_genotype_data | parse_ccle_genotype_data |
parse_cosmic_genotype_data | parse_cosmic_genotype_data |
parse_vcf_file | Filter Parsed VCF Files |
parse_vcf_query_into_db | parse_vcf_query_into_db This function adds the variants of... |
read_library_names | Library Name Reader |
read_mutation_grange_objects | read_mutation_grange_objects |
remove_ccls_from_database | Remove Cancer Cell Line |
remove_library_from_database | Remove entire Library from Database |
show_contained_ccls | show_contained_ccls |
show_contained_variants_for_ccl | Variants In Cancer Cell Line |
show_contained_variants_in_library | All variants contained in reference library |
show_which_ccls_contain_variant | Cancer cell lines with specific variant |
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