init_and_load_identification: init_and_load_identification

In RaikOtto/Younikorn: Identification of cancer cell lines based on their weighted mutational/ variational fingerprint

init_and_load_identification

Description

Initiate the analysis Output basic information

Usage

init_and_load_identification( 
    verbose,
    ref_gen,
    vcf_file,
    output_dir
)

Arguments

verbose	Print additional information
ref_gen	Reference genome version. All training sets are associated with a reference genome version. Default: GRCH37
vcf_file	Path to vcf_file
output_dir	Output directory for identification results

Details

init_and_load_identification parses vcf file and output basic information

Value

Three file path instances and the fingerprint

RaikOtto/Younikorn documentation built on Oct. 18, 2022, 1:21 a.m.