pkg <- read.dcf("DESCRIPTION", fields = "Package")[1] description <- read.dcf("DESCRIPTION", fields = "Description")[1]
r pkg
: r gsub("echoverse module: ","", description)
This R package is part of the echoverse suite that supports echolocatoR
:
an automated genomic fine-mapping pipeline.
If you use r pkg
, please cite:
r citation(pkg)$textVersion
and
N Kerimov, JD Hayhurst, K Peikova, et al. A compendium of uniformly processed human gene expression and splicing quantitative trait loci. Nat Genet 53, 1290–1299 (2021). https://doi.org/10.1038/s41588-021-00924-w
if(!require("remotes")) install.packages("remotes") remotes::install_github("RajLabMSSM/`r pkg`") library(`r pkg`)
catalogueR
are partly derived from the
eQTL Catalogue tutorial. The ALT allele is always the effect allele in eQTL Catalogue.
Additional eQTL Catalogue resources:
Brian
M. Schilder, Bioinformatician II
Raj Lab
Department
of Neuroscience, Icahn School of Medicine at Mount Sinai
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