getBiomartFromOrganism: Guess biomart from organism name
In Roleren/uORFomePipe: uORF prediction in R
getBiomartFromOrganism R Documentation
Guess biomart from organism name
Description
Guess biomart from organism name
Usage
getBiomartFromOrganism(organism, biomart = "ensembl")
Arguments
organism
scientific name of organism,
like Homo sapiens, Danio rerio, etc.
biomart
default "ensembl", get gene symbols and GO terms for uORF genes. Will
be automaticly detected by organism name in ensembl database.
Set to NULL if you don't want to check Gene symbols and GO terms.
Value
a character with dataset used
Roleren/uORFomePipe documentation built on Jan. 14, 2024, 5:11 a.m.
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| getBiomartFromOrganism | R Documentation |
Guess biomart from organism name
Description
Guess biomart from organism name
Usage
getBiomartFromOrganism(organism, biomart = "ensembl")
Arguments
organism |
scientific name of organism, like Homo sapiens, Danio rerio, etc. |
biomart |
default "ensembl", get gene symbols and GO terms for uORF genes. Will be automaticly detected by organism name in ensembl database. Set to NULL if you don't want to check Gene symbols and GO terms. |
Value
a character with dataset used
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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