getTissueTable: Create tissueTable for cage, 1 row per unique uorf Tissue...
In Roleren/uORFomePipe: uORF prediction in R
View source: R/DataBaseCreator.R
getTissueTable R Documentation
Create tissueTable for cage, 1 row per unique uorf
Tissue must have at least 2 CAGE libraries supporting the uORF
to declare a hit in that tissue. If only one sample, that sample
must include uORF to be a hit.
Description
Create tissueTable for cage, 1 row per unique uorf
Tissue must have at least 2 CAGE libraries supporting the uORF
to declare a hit in that tissue. If only one sample, that sample
must include uORF to be a hit.
Usage
getTissueTable(cageTable, dataFolder)
Arguments
cageTable
an ORFik experiment of cage, or NULL
dataFolder
a path to folder with data
Roleren/uORFomePipe documentation built on Jan. 14, 2024, 5:11 a.m.
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View source: R/DataBaseCreator.R
| getTissueTable | R Documentation |
Create tissueTable for cage, 1 row per unique uorf Tissue must have at least 2 CAGE libraries supporting the uORF to declare a hit in that tissue. If only one sample, that sample must include uORF to be a hit.
Description
Create tissueTable for cage, 1 row per unique uorf Tissue must have at least 2 CAGE libraries supporting the uORF to declare a hit in that tissue. If only one sample, that sample must include uORF to be a hit.
Usage
getTissueTable(cageTable, dataFolder)
Arguments
cageTable |
an ORFik experiment of cage, or NULL |
dataFolder |
a path to folder with data |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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