Files in ShadowFiendSF/GSminer
Select gold standard including positive and negative genes pairs based on the Gene Ontology
DESCRIPTION
NAMESPACE
NEWS
R/AllClass.R
R/AllGenerics.R
R/GSminer-package.R
R/RcppExports.R
R/accessors.R
R/buildMapping.R
R/geneSim.R
R/getThreshold.R
R/loadBPoffsprings.R
R/output.R
R/removedup.R
R/utilities.R
R/zzz.R
README.md
data/TAIR.rda
inst/NEWS
inst/extdata/TAIR.GO
man/CC2gene-methods.Rd
man/GO2igraph.Rd
man/GOCluster.Rd
man/GSminer-class.Rd
man/GSminerPackage.Rd
man/GeneGOMapping-class.Rd
man/MappingFileValid.Rd
man/TAIR.GO.Rd
man/buildMapping-methods.Rd
man/filterNeg-GSminer-method.Rd
man/filterNeg-methods.Rd
man/gene2BP-methods.Rd
man/geneSim.Rd
man/getGOSim.Rd
man/getThreshold-methods.Rd
man/loadBPoffsprings-methods.Rd
man/loadCCoffsprings-methods.Rd
man/outputPosNeg-methods.Rd
man/removeDup.Rd
man/selectGO-methods.Rd
src/RcppExports.cpp
src/Rinit.c
src/elemLen.c
src/go2gene.cpp
src/sortpaste.c
src/widget.cpp
tests/testthat.R
tests/testthat/test-GSminer.R
vignettes/GSminer.Rmd
vignettes/figures/flowchart.png
vignettes/figures/similarity.png
