buildMapping-methods: Method buildMapping.
In ShadowFiendSF/GSminer: Select gold standard including positive and negative genes pairs based on the Gene Ontology
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Method buildMapping.
Usage
1
2
## S4 method for signature 'GeneGOMapping'
buildMapping(object, header = FALSE)
Arguments
object
the GeneGOMapping object
header
input mapping file has a header or not
Value
a GeneGOMapping with list of GO to Gene mapping
Author(s)
Li Zhaohong && Wu Zefeng
Examples
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5
#relationship between the gene and GO terms
#sep used in the input file by default is tab
inputFile <- paste0(system.file(package = "GSminer"), "/extdata/TAIR.GO")
miner1 <- GSminer(inputFile = inputFile, sep = "\t")
buildMapping(miner1@ggmapping)
ShadowFiendSF/GSminer documentation built on May 29, 2019, 3:03 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Method buildMapping.
Usage
1 2 | ## S4 method for signature 'GeneGOMapping'
buildMapping(object, header = FALSE)
|
Arguments
object |
the GeneGOMapping object |
header |
input mapping file has a header or not |
Value
a GeneGOMapping with list of GO to Gene mapping
Author(s)
Li Zhaohong && Wu Zefeng
Examples
1 2 3 4 5 | #relationship between the gene and GO terms
#sep used in the input file by default is tab
inputFile <- paste0(system.file(package = "GSminer"), "/extdata/TAIR.GO")
miner1 <- GSminer(inputFile = inputFile, sep = "\t")
buildMapping(miner1@ggmapping)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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