deployIT: Writes the deployment of an intervention.

In SwissTPH/r-openMalariaUtilities: Helper functions to provide easier usage of Open Malaria from R

Writes the deployment of an intervention.

Description

Writes the deployment of an intervention.

Usage

deployIT(
  baseList,
  component = "ITN",
  cumulative = FALSE,
  effects = NULL,
  startDate = NULL,
  endDate = NULL,
  interval = NULL,
  dates = NULL,
  minAge = NULL,
  maxAge = NULL,
  coverage = NULL,
  subpop = NULL
)

deploy_IT(
  baseList,
  component = "ITN",
  cumulative = FALSE,
  effects = NULL,
  startDate = NULL,
  endDate = NULL,
  interval = NULL,
  dates = NULL,
  minAge = NULL,
  maxAge = NULL,
  coverage = NULL,
  subpop = NULL
)

Arguments

baseList	List with experiment data.
component	Name of intervention.
cumulative	Default is FALSE. Do not set to TRUE.
effects	Either NULL or vector of strings, e.g. c("det","pre","post")
startDate	Date in YYYY-MM-DD format.
endDate	Date in YYYY-MM-DD format.
interval	A string like '1 weeks'. Same as in seq.Date(). Or a list composed of the entries 'days' (optional), 'months' (optional) and 'years'. If a list is used, startDate and endDate are not used and can be NULL.
dates	If NULL, startDate, endDate and interval are used, else a vector of dates in YYYY-MM-DD format. Can be a placeholder.
minAge	Minimum age for deployment (used in SMC). Can be a placeholder.
maxAge	Maximum age for deployment (used in SMC). Can be a placeholder.
coverage	Value or variable of coverage. Can be a placeholder.
subpop	Either NULL or string. Concatenation component+"-"+subpop will be id in subpopulation intervention should be restricted to (see restrictToSubPop in OpenMalaria)

SwissTPH/r-openMalariaUtilities documentation built on Sept. 14, 2024, 1:34 a.m.