deploy_it_compat: Writes the deployment of an intervention. Compatibility...

In SwissTPH/r-openMalariaUtilities: Helper functions to provide easier usage of Open Malaria from R

Writes the deployment of an intervention. Compatibility version.

Description

Writes the deployment of an intervention. Compatibility version.

Usage

deploy_it_compat(
  baseList,
  component = "ITN",
  cumulative = FALSE,
  effects = NULL,
  y1 = 2000,
  y2 = NULL,
  m1 = 1,
  m2 = NULL,
  d1 = 1,
  d2 = NULL,
  every = 1,
  interval = "month",
  SIMSTART = "1918-01-01",
  minAge = NULL,
  maxAge = NULL,
  coverage = NULL,
  byyear = FALSE,
  deployvar = NULL,
  subpop = FALSE
)

Arguments

baseList	List with experiment data.
component	Name of intervention.
cumulative	default is FALSE. Do not set to TRUE.
effects	Either NULL or c("det","pre","post")
y1	Year of the first date (surveys starting from year y1)
y2	Year of the end date (surveys continuing until year y2)
m1	Month of the first date
m2	Month of the end date
d1	Day of the first date
d2	Day of the end date
every	Interval size
interval	Interval size (days, weeks, )
SIMSTART	Starting date of the simulations in the format "yyyy-mm-dd"
minAge	Minimum age for deployment (used in SMC)
maxAge	Maximum age for deployment (used in SMC)
coverage	Value or variable of coverage
byyear	If TRUE, allows coverage to vary by year ('histITNcov2000',...)
deployvar	Allows for deployment dates to vary (across years y1, ..., y2)
subpop	If TRUE, then restricts to a subpopulation (see restrictToSubPop in OpenMalaria)

SwissTPH/r-openMalariaUtilities documentation built on Sept. 14, 2024, 1:34 a.m.