API for SwissTPH/r-openMalariaUtilities
Helper functions to provide easier usage of Open Malaria from R
| Global functions | |
|---|---|
| .addExpToDB | Man page Source code |
| .addPlaceholdersToDB | Man page Source code |
| .addResultsToDB | Man page Source code |
| .addScenToDB | Man page Source code |
| .calculateSmoothCompact | Man page Source code |
| .calculateSmoothCompactHalflife | Man page Source code |
| .compressFiles | Man page Source code |
| .createDB | Man page Source code |
| .createFolders | Man page Source code |
| .createResultsTable | Man page Source code |
| .createTables | Man page Source code |
| .defineInterventionsHeader | Man page Source code |
| .deployTime_compat | Man page Source code |
| .equalizePlaceholders | Man page Source code |
| .getIndex | Man page Source code |
| .indexList | Man page Source code |
| .makeXmlRoot | Man page Source code |
| .placeholderCollect | Man page Source code |
| .placeholderseqGen | Man page Source code |
| .printDebug | Man page Source code |
| .printVerbose | Man page Source code |
| .recXML | Man page Source code |
| .scenariosFilenames | Man page Source code |
| .scenariosGenFiles | Man page Source code |
| .scenariosRowSelect | Man page Source code |
| .setFunArgs | Man page Source code |
| .syncBoth | Man page Source code |
| .syncDisk | Man page Source code |
| .syncMem | Man page Source code |
| .synchronizeCache | Man page Source code |
| .thirdDimensionGen | Source code |
| .unqouteExpr | Man page Source code |
| .useDir | Man page Source code |
| .xmlAddChunks | Man page Source code |
| .xmlAddList | Man page Source code |
| .xmlMakeDocRec | Man page Source code |
| .xmlMonitoringTimeRegularSeq | Man page Source code |
| .xmlTimeBlockSeq | Man page Source code |
| .xmlTimeRegularSeq | Man page Source code |
| BEN | Man page |
| CMR | Man page |
| GHA | Man page |
| HTI | Man page |
| MOZ | Man page |
| TZA | Man page |
| UGA | Man page |
| ageGroupsGen | Man page Source code |
| changeHSCFRGen | Man page Source code |
| changeHSpSeqInGen | Man page Source code |
| cleanLogs | Man page Source code |
| clean_logs | Man page |
| cleanupExperiment | Man page Source code |
| clearCache | Man page Source code |
| clear_cache | Man page |
| collectResults | Man page Source code |
| collect_results | Man page |
| createBaseXml | Man page Source code |
| create_base_xml | Man page |
| defineChangeHS | Man page Source code |
| defineDemography | Man page Source code |
| defineEntomology | Man page Source code |
| defineHealthSystem | Man page Source code |
| defineIRS | Man page Source code |
| defineITN | Man page Source code |
| defineImportedInfections | Man page Source code |
| defineLarv | Man page Source code |
| defineNothing | Man page Source code |
| defineTreatSimple | Man page Source code |
| defineVaccine | Man page Source code |
| defineVectorControl | Man page Source code |
| define_IRS | Man page |
| define_IRS_compat | Man page Source code |
| define_ITN | Man page |
| define_ITN_compat | Man page Source code |
| define_changeHS | Man page |
| define_changeHS_compat | Man page Source code |
| define_demography | Man page |
| define_entomology | Man page |
| define_health_system | Man page |
| define_importedInfections | Man page |
| define_importedInfections_compat | Man page Source code |
| define_larv | Man page |
| define_larv_compat | Man page Source code |
| define_nothing | Man page |
| define_nothing_compat | Man page Source code |
| define_treatSimple | Man page |
| define_treatSimple_compat | Man page |
| define_vaccine | Man page |
| define_vector_control | Man page |
| deleteLogs | Man page Source code |
| delete_logs | Man page |
| deployIT | Man page Source code |
| deploy_IT | Man page |
| deploy_cont_compat | Man page Source code |
| deploy_it_compat | Man page Source code |
| expInfo | Man page Source code |
| extractList | Man page Source code |
| finalizeScenarios | Man page Source code |
| finalize_scenarios | Man page |
| getCache | Man page Source code |
| get_cache | Man page |
| listCache | Man page Source code |
| list_cache | Man page |
| loadCache | Man page |
| loadExperiment | Man page Source code |
| load_cache | Man page |
| load_experiment | Man page |
| make_ento_compat | Man page Source code |
| monitoringCohortsGen | Man page Source code |
| monitoringContinuousGen | Man page Source code |
| monitoringSurveyOptionsGen | Man page Source code |
| monitoringSurveyTimesGen | Man page Source code |
| omOutputDict | Man page Source code |
| processFile | Man page Source code |
| putCache | Man page Source code |
| put_cache | Man page |
| readOutputFile | Man page Source code |
| readResults | Man page Source code |
| readScenarios | Man page Source code |
| read_scenarios | Man page |
| runSimulations | Man page Source code |
| run_simulations | Man page |
| setupDirs | Man page Source code |
| setupOM | Man page Source code |
| setupScenarios | Man page Source code |
| setup_dirs | Man page |
| setup_om | Man page |
| setup_scenarios | Man page |
| splitSeq | Man page Source code |
| storeScenarios | Man page Source code |
| store_scenarios | Man page |
| surveyAgeGroupsGen | Man page Source code |
| syncCache | Man page Source code |
| sync_cache | Man page |
| toggleDebug | Man page Source code |
| toggleVerbose | Man page Source code |
| validateXML | Man page Source code |
| validate_xml | Man page |
| writeCache | Man page Source code |
| write_cache | Man page |
| write_demography_compat | Man page Source code |
| write_end_compat | Man page Source code |
| write_healthsys_compat | Man page Source code |
| write_monitoring_compat | Man page Source code |
| xmlTimeGen | Man page Source code |
