setupScenarios: Generate scenarios from a base xml file

In SwissTPH/r-openMalariaUtilities: Helper functions to provide easier usage of Open Malaria from R

Generate scenarios from a base xml file

Description

Function generates scenarios defined in a data frame. In this data frame each row is a scenario, placeholder values are in the columns. Column names correspond to the placeholder names.

Usage

setupScenarios(
  baseFile = NULL,
  prefix = NULL,
  scenarios,
  ncores = 1,
  rowStart = NULL,
  rowEnd = NULL
)

setup_scenarios(
  baseFile = NULL,
  prefix = NULL,
  scenarios,
  ncores = 1,
  rowStart = NULL,
  rowEnd = NULL
)

Arguments

baseFile	Compatible base xml file.
prefix	Prefix for the scenario files.
scenarios	Data frame containing the values for the placeholders. One row per scenario, placeholders in columns. Column names correspond to the placeholder names.
ncores	Number of parallel processes to use.
rowStart	Starting row. Optional.
rowEnd	End row. Optional.

SwissTPH/r-openMalariaUtilities documentation built on Sept. 14, 2024, 1:34 a.m.