SydneyBioX/CiteFuse: CiteFuse: multi-modal analysis of CITE-seq data

CiteFuse pacakage implements a suite of methods and tools for CITE-seq data from pre-processing to integrative analytics, including doublet detection, network-based modality integration, cell type clustering, differential RNA and protein expression analysis, ADT evaluation, ligand-receptor interaction analysis, and interactive web-based visualisation of the analyses.

Getting started

Package details

Bioconductor views GeneExpression SingleCell
Maintainer
LicenseGPL-3
Version1.3.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("SydneyBioX/CiteFuse")
SydneyBioX/CiteFuse documentation built on April 14, 2021, 6:01 p.m.