CiteFuse is a streamlined package consisting of a suite of tools for pre-processing, modality integration, clustering, differential RNA and ADT expression analysis, ADT evaluation, ligand-receptor interaction analysis, and interactive web-based visualization of CITE-seq data
Install CiteFuse required Bioconductor 3.10
library(BiocManager) install(version = "3.10")
BiocManager::install(c("SummarizedExperiment", "S4Vectors", "SingleCellExperiment", "scater", "scran"))
You can find the vignette at our website: https://sydneybiox.github.io/CiteFuse/articles/CiteFuse.html.
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